|
| Home of the Soderlund lab
|
|
|
|
| The Soderlund lab is part of the
BIO5 Institute at the University of Arizona
|
|
| 
Lab | Publications | Github
|
|
|
|
| Actively Supported Software
|
|
|
|
|
SyMAP Synteny mapping and analysis program
Compute the synteny between two sequences genomes. Query and view two or more genomes at a time.
Download and documentation
|
|
|
|
|
TCW Transcriptome computational workbench
Build and query an annotated database with gene ontology and differential expression. Build and query a comparative transcriptome database.
Download and documentation
|
|
|
|
| Other Software
|
|
|
|
|
AW Allele Workbench for allele-specific expression
A pipeline to compute heterozygous SNPs from RNAseq data. Compute Allele Imbalance (AI). Query and view the results.
Download and documentation
|
|
|
|
|
FPC FingerPrinted Contigs for building physical maps
Compute a physical map from restriction fragments. Query and view the resulting contigs.
See FPC.
|
|
|
|
| Supported by
|
|
|
|
