The AnnoDB Hits option under Basic Filters searches by Hit ID, Description and/or filters.

• Select the Search checkbox to enter a substring for searching.
• Select the Filters checkbox to set one or more associated filters.
• The text above the table (i.e. Filters: shows the filters applied.
• Select a hit followed by Seq Table will show all the associated sequences in the Sequence Table.

The decimal number display can be changed with Decimal Display.

Uncheck the Group by Hit ID to view the sequences.

Filters Seq: This row of options apply to the sequences that align to the annoDB hit (generally protein, but can be nucleotide). Selecting TPM brings up the window on the right. By selecting "RoSt", which is the p-value for the counts of Root compared to Stem, the result would be all annoDB hits that have at least one sequence with RoSt<0.05.

Filters Hit: This row of options apply to the annotation assigned to the annoDB hit. Selecting AnnoDBs brings up a window of all available annoDBs, e.g. "sp -- plants", where one or more of these may be selected. By default, they are all selected. Selecting Species brings up a window of all available species (shown on the right), where one or more may be selected. By default, they are all selected. Selecting GO, etc brings up the window shown below.

Selected: Copy... provides copying to clipboard the Hit ID, Description or Hit Sequence of the selected sequence. Show... is shown above, with a Assigned GO for hit example on the right. Export... has the same first two items as Show..., but writes to file the GO info or GO IDs; the GO IDs can be loaded in the GO Basic panel with its Load File.

Table... has Show column stats, Copy table and Export table.