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Ordering wild Prunus yedoensis against Prunus persicaPrunus yedoensis (P.yedo): The draft genome of Prunus yedoensis from NCBI (24-May-25, GCA_005406145.1). The file contained 4,571 scaffolds for a total of 690,105,700 bases. The scaffolds greater than 300,000bp were loaded into SyMAP for a total of 331 scaffolds and 439,695,718 base.Prunus persica (Peach): The complete genome of Prunus persica from NCBI (24-May-25, GCF_000346465.2). The downloaded files contained 8 chromosomes, 225,694,811 bases and 22,988 genes. Using SyMAP v5.6.8, the P.yedo draft sequence was aligned to, and ordered against, the completed peach genome. The resulting dot plot is shown below. | |||||||
Email Comments To: symap@agcol.arizona.edu |