AGCoL Peach Draft to Peach Genome UA
BIO5
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Ordering wild Prunus yedoensis against Prunus persica

Prunus yedoensis (P.yedo): The draft genome of Prunus yedoensis from NCBI (24-May-25, GCA_005406145.1). The file contained 4,571 scaffolds for a total of 690,105,700 bases. The scaffolds greater than 300,000bp were loaded into SyMAP for a total of 331 scaffolds and 439,695,718 base.

Prunus persica (Peach): The complete genome of Prunus persica from NCBI (24-May-25, GCF_000346465.2). The downloaded files contained 8 chromosomes, 225,694,811 bases and 22,988 genes.

Using SyMAP v5.6.8, the P.yedo draft sequence was aligned to, and ordered against, the completed peach genome. The resulting dot plot is shown below.

P.yedo.Peach

Email Comments To: symap@agcol.arizona.edu